[CPMD-list] Energy components in PIMD
Axel Kohlmeyer
akohlmey at cmm.chem.upenn.edu
Fri May 30 14:17:07 CEST 2008
On Fri, 30 May 2008, ukasz Walewski wrote:
LW> Applying a thermostat on the electrons gave the stable fictitious
LW> dynamics, however the conserved energy took over the drift... (see
LW> attached graphs and the input file). Rate of the drift is ~1e-6 Ha/ps,
LW> i.e. smaller by the factor of 10 than the drift in EKINC without a
LW> termostat. My feeling is that it is better to have the total energy
LW> conserved and live with the drift in EKINC. What do you think ?
i would go for the thermostat. it is safer.
LW> I turned the restraints on. Following the route you outlined in the
LW> previous e-mail I came upon the kval = 0.000001 [unknown units] which
LW> gives the force of 1.8e-6 [a.u.] in the 1 A distance from the
LW> equilibrium position. The forces usually seen during MD run are of the
LW> order of 1e-3 - 1e-4 while in-plane forces are 1e-5. Isn't it possible
LW> that the drift in EHAM comes from the restraints ?
no. at least it should not. there were some funnies in the code related
to restraints that we fixed recently, but if i remember correctly those
were limited to BO dynamics. it is, however, extremely simple to verify
it. just run the exact same trajectory without the restraints.
cheers,
axel.
LW>
LW> Regards,
LW> Lukasz
LW>
--
=======================================================================
Axel Kohlmeyer akohlmey at cmm.chem.upenn.edu http://www.cmm.upenn.edu
Center for Molecular Modeling -- University of Pennsylvania
Department of Chemistry, 231 S.34th Street, Philadelphia, PA 19104-6323
tel: 1-215-898-1582, fax: 1-215-573-6233, office-tel: 1-215-898-5425
=======================================================================
If you make something idiot-proof, the universe creates a better idiot.
More information about the CPMD-list
mailing list