[CPMD-list] Energy components in PIMD
Axel Kohlmeyer
akohlmey at cmm.chem.upenn.edu
Tue May 27 19:37:31 CEST 2008
On Tue, 27 May 2008, ukasz Walewski wrote:
LW> > yep. so either you have to live with what you have using the
LW> > translation/rotation correction infrequently, remove the subtract
LW> > COMVEL/ROTVEL altogether after equilibration or use 3 or 4 _very_
LW> > soft position _restraints_ on some of the outer carbon atoms that
LW> > will also make sure that the system stays where it should.
LW>
LW> Well, I will try the last option. However I have no clue on what "very
LW> soft" means, i.e. what might be the "soft" value for kval ? The manual
LW> is silent on the units of this parameter. Otherwise one could have taken
LW> the force constant of the C-H bond from any common force filed (e.g.
LW> Gromos) and divide it by 10 or even 100. What is your recommendation ?
i don't know what a proper value is, i would play around with a simple
system (benzene?) and low cutoff (you don't care about the correct
structure). if you do a single point wavefunction optimization with
PRINT FORCES ON, you see the typical size of forces. just do a guess
of what kind of force you want to see at what distance from a position.
even a very small force constant should work, since the the system
should stay in position anyways.
cheers,
axel.
LW>
LW> Best regards,
LW> Lukasz
LW>
--
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Axel Kohlmeyer akohlmey at cmm.chem.upenn.edu http://www.cmm.upenn.edu
Center for Molecular Modeling -- University of Pennsylvania
Department of Chemistry, 231 S.34th Street, Philadelphia, PA 19104-6323
tel: 1-215-898-1582, fax: 1-215-573-6233, office-tel: 1-215-898-5425
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If you make something idiot-proof, the universe creates a better idiot.
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