[CPMD-list] problem with path integrals restart
Serge Ivanov
sergei.ivanov at theochem.ruhr-uni-bochum.de
Wed Apr 2 14:52:59 CEST 2008
Dear Marek,
Here are my two cents: DIPOLE DYNAMICS is not implemented in PI branch
I have a local hack for PI-BO, but not for PI-CP. I hope to find time to
code it as well, but probably not earlier than in summer.
PI simulations with 2 beads are a little bit ill-defined. I would suggest
to increase the number of beads at least to four. I will need to have a
look on how those radii are computed, but such a problem can be connected
to your bead number. In fact, you have to study the bead convergence for
your system and temperature. The rule of thumb is that if you have
hydrogens in your system at around 100K - then you need at least 32 beads.
As Axel pointed out, I can't say anything more specific without having
more information from your side.
WBR, Serge
On Wed, 2 Apr 2008, Marek Naryniecki wrote:
> Date: Wed, 2 Apr 2008 11:50:01 +0200 (CEST)
> From: Marek Naryniecki <marek at elrond.chem.uni.wroc.pl>
> To: cpmd-list at cpmd.org
> Subject: [CPMD-list] problem with path integrals restart
>
>
> Dear All
>
> I have some problems with calculations using PI. When I start MD or when I
> restart MD i get:
>
> ***************************************************************
> * CHARACTERISTIC RADII *
> ***************************************************************
> SPECIES R OF GYRATION FREE PARTICLE (IN ANGSTROM)
> 1 P 0.06799 Infinity
> 2 O 0.05446 Infinity
> 3 K 0.08015 Infinity
> 4 H 0.12800 Infinity
> R OF SUSCEPTIBILITY
> 1 P NaN Infinity
> 2 O NaN Infinity
> 3 K NaN Infinity
> 4 H NaN Infinity
> R OF CORRELATION
> 1 P 0.13599 Infinity
> 2 O 0.10892 Infinity
> 3 K 0.16030 Infinity
> 4 H 0.25600 Infinity
>
> I noticed that when I used DEBROGLIE CENTROID 500.d0 during replics
> generation a then start MD in 120K i get this problem. when i start MD
> 320K it starts ok, but after 5 steps i stop, restart md and the problem
> apear.
>
> what is the reason of that? After that calculations go on and average
> values for bonds seems to be good.
> I looked into cpmd code but without succes.
>
> in my input i put
> &CPMD
> PATH INTEGRALS
> MOLECULAR DYNAMICS CP
> RESTART COORDINATES WAVEFUNCTION LATEST VELOCITEIES
> DIPOLE DYNAMICS
> TIMESTEP
> 3.0
> MAXSTEP
> 100000
> STRUCTURE BONDS ANGLES
> &END
> &DFT
> FUNCTIONAL PBE
> &END
> &SYSTEM
> TESR
> 3
> ANGSTROM
> SYMMETRY
> TETRAGONAL
> CELL ABSOLUTE DEGREE
> 7.4521 7.4521 6.9740 90.0 90.0 90.0
> CUTOFF
> 100.0
> &END
> ..
> &PIMD
> TROTTER DIMENSION
> 2
> NORMAL MODES
> 1.d0
> FACMASS
> 1.d0
> PRINT LEVEL
> 1
> &END
>
> Please help me.
>
> Best Regards,
>
>
> Marek Naryniecki
> Wydzial Chemii
> Uniwersytet Wroclawski
>
>
>
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_____________________________________________________________________
| Dr. Sergei Ivanov | Phone : ++49 (0)234-32 26751 |
| Lehrstuhl fuer Theoretische Chemie | Fax : ++49 (0)234-32 14045 |
| Ruhr-Universitaet Bochum | sergei.ivanov at theochem.rub.de |
| D-44780 Bochum | http://www.theochem.rub.de/ |
|_____________________________________________________________________|
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