[CPMD-list] negative frequencies obtained after vibrational analysis
Axel Kohlmeyer
akohlmey at cmm.chem.upenn.edu
Tue May 29 17:30:14 CEST 2007
On Tue, 29 May 2007, Nagesh Babu Idupulapati wrote:
NBI> Dear all
dear nagesh,
NBI> I did geometry optimization for a particular system and then
NBI> vibrational analysis to find out whether the optimized system is
NBI> ground state or not.
could you comment on where you got your initial coordinates from
and whether you are looking at a crystal structure or an isolated
molecule?
NBI> From the output file, I found more negative harmonic frequencies as
NBI> shown below:
NBI>
NBI>
NBI> OUTPUT FILE FROM VIBRATIONAL ANALYSIS:
NBI>
NBI> HARMONIC FREQUENCIES [cm**-1]:
NBI>
NBI> -72559.0607 -28053.3624 -1009.0848 .0012
are you certain that you restarted from the optimized coordinates?
NBI> .0046 .0081 .0101 .0115
...
NBI> So my question is, the geometry optimization parameters I used in my
NBI> input file were not sufficient to obtain the ground state?
if you have many degrees of freedom and start from a very symmetric
initial structure, the geometry optimizer may not find the minimum
that you are aiming at. you can try running a short MD and/or break
symmetry with the RANDOMIZE keyword.
cheers,
axel.
--
=======================================================================
Axel Kohlmeyer akohlmey at cmm.chem.upenn.edu http://www.cmm.upenn.edu
Center for Molecular Modeling -- University of Pennsylvania
Department of Chemistry, 231 S.34th Street, Philadelphia, PA 19104-6323
tel: 1-215-898-1582, fax: 1-215-573-6233, office-tel: 1-215-898-5425
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