[CPMD-list] Bond length constraint in a QMMM simulation
Nisanth Nair
nisanth.nair at theochem.ruhr-uni-bochum.de
Mon May 21 23:01:24 CEST 2007
Dear Paul,
CONSTRAINT is correctly working, at least in the recent versions of the
code. Please check if you have given the indices of the atoms correctly.
Note that you need to provide them in Gromos ordering.
Check the output file for the corresponding printing.
On the other hand the RESTRAINTS are not properly tested in the
Gromos QM/MM implementation, and as far I remember
they still use the CPMD ordering..a bit more of work
needed in this respect to clean it up!
hope it helps,
with best regards,
Nisanth
On Mon, 21 May
2007, Paul Fleurat-Lessard wrote:
> Dear Cpmd'ers,
>
> I am using the Gromos-QM/MM version of the CPMD code, and I would like
> to constrain a bond length between two MM atoms. I tried to add the
> constraint into the CONSTRAINTS block of the &ATOMS list, but it seems
> that it has no effect.
> Should I constrain this bond in the Gromos input or topology file directly ?
>
> Thanks in advance,
> Paul.
> --
> Fleurat-Lessard Paul, Lecturer e-mail: Paul.Fleurat-Lessard at ens-lyon.fr
> Laboratoire de Chimie
> Ecole Normale Supérieure de Lyon Tel: + 33 (0)4 72 72 81 54
> 46, Allée d'Italie Fax: + 33 (0)4 72 72 88 60
> 69364 Lyon Cedex 07
>
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===========================================================================
Nisanth N. Nair
Lehrstuhl fuer Theoretische Chemie Tel: ++49 (0)234 32 22121
Ruhr-Universitaet Bochum Fax: ++49 (0)234 32 14045
Universitaetstrasse 150
D-44801 Bochum, Germany
Email: nisanth.nair at theochem.ruhr-uni-bochum.de
Web : http://www.theochem.ruhr-uni-bochum.de
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