[CPMD-list] "MEMORY| ALLOCATION FAILED" error message
Axel Kohlmeyer
axel.kohlmeyer at theochem.ruhr-uni-bochum.de
Fri Mar 4 20:53:23 CET 2005
On Fri, 4 Mar 2005, Robert Williams wrote:
hi guys,
this is just to sum up some 'intelligence' i have gathered so far:
- there is a known problem with the intel version 8.x compiler
producing exectuables, that need much more stack space.
this is solved by using 'unlimit' (in tcsh) or 'ulimit -s unlimited'
(in bash/zsh). this is a legacy of the fortran frontend being
derived from the good ole DEC/Compaq/... compilers. to avoid
having each user put this into their login scrips, you may ask
your system administrator to modify the /etc/security/limits.conf
file to contain (e.g.)
* soft stack 327680
* hard stack 1048576
this can also be done on a per-user (or better per-group basis).
- on a 32-bit machine malloc returns memory addresses that are
32-bit _unsigned_ integers or 0 if the malloc fails.
in the file memory.F the respective test is done for <= 0,
unless you are on a HP machine.
modifying the code around line 105 of memory.F to
#if defined(__HP) || defined(__PGI) || defined(LINUX_IFC) || defined(__alpha)
IF(IP_XM.EQ.0) THEN
IERROR=1
ENDIF
#else
avoids that problem.
- there are some quirky things on fedora (or redhat EL3+) especially
with the support for 32-bit development on x86_64 (i.e. athlon64/FX
and opteron). i have made a few tests, also with mandrake and suse
and found, that for some strange reason those machines worked best
with suse. since every distribution uses an 'improved' kernel combined
with bob's experiences using a stock kernel, i can only assume, that
one of the 'improvements' in the fedora kernels is biting back.
- using the intel MKL, as it uses threads, might complicate
the situation since one of the major differences between
older and newer distributions is the threads support.
from my experience, i have no problems compiling and running intel 8.x
compiled cpmd binaries on redhat 7.x, redhat 9, suse 9.x, mandrake 10,
when using ATLAS library binaries that were compiled on redhat 7.x (mind
you the intel compilers and libraries are built on redhat 7.3).
for suse and mandrake this also applies to the 32-bit version on
x86_64 machines.
please remind me, if i am missing something.
regards,
axel.
[...]
--
=======================================================================
Dr. Axel Kohlmeyer e-mail: axel.kohlmeyer at theochem.ruhr-uni-bochum.de
Lehrstuhl fuer Theoretische Chemie Phone: ++49 (0)234/32-26673
Ruhr-Universitaet Bochum - NC 03/53 Fax: ++49 (0)234/32-14045
D-44780 Bochum http://www.theochem.ruhr-uni-bochum.de/~axel.kohlmeyer/
=======================================================================
If you make something idiot-proof, the universe creates a better idiot.
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