[CPMD-list] Announce: CPMD VMD visualization tutorial
HW Sheng
hwsheng at jhu.edu
Thu Dec 18 20:48:41 CET 2003
Axel,
Many thanks for making the wonderful webpage available to us.
Howard
----- Original Message -----
From: "Axel Kohlmeyer" <axel.kohlmeyer at theochem.ruhr-uni-bochum.de>
To: <cpmd-list at cpmd.org>; <vmd-l at ks.uiuc.edu>
Sent: Thursday, December 18, 2003 2:25 PM
Subject: [CPMD-list] Announce: CPMD VMD visualization tutorial
>
> dear readers of the CPMD and VMD mailing lists,
>
> i am pleased to officially announce my tutorial webpages
> for visualizing molecular simulation / electron structure
> data using the VMD program (http://www.ks.uiuc.edu/Research/vmd/).
>
> the tutorial is available at:
>
> http://www.theochem.ruhr-uni-bochum.de/go/cpmd-vmd.html
>
> although the main focus and the initial inspiration
> of these pages root in the need to visualize data
> from ab initio molecular dynamics simulations with
> the CPMD program (http://www.cpmd.org/), many examples
> and scripts should be easily transferable to other
> programs or at least be usable as template for your
> own scripts or visualization. Most of the examples and
> many of the required inputs, scripts and data files
> are available for download.
>
> many of the examples shown in the tutorial have become possible
> because the recently released version 1.8.2 VMD incorporates
> largely improved support for xyz files with
> velocities/gradients, xyz movies, native CPMD trajectory
> files, gaussian cube files and visualization of
> volumetric data. With these additions and the
> flexible scriptability, VMD has become a very powerful tool
> for visualizing (ab initio) molecular dynamics and
> electron structure data.
>
> many thanks to the VMD people for making
> such a nice visualization tool available.
>
> a special thanks to john stone, holger langer,
> eduard schreiner, amalendu chandra, volker kleinschmidt,
> and domink marx for providing inspiration, support,
> encouragement and data for the examples.
>
> corrections, improvements, suggestions, praise,
> flames (if deserved), donations (in the form of
> graphics hardware and/or computer resources)
> are highly welcome. although the amount of time i
> can dedicate to this kind of work is rather limited,
> i hope be able further improve and expand the tutorial
> in the future.
>
> i hope you will have as much fun looking at and
> learning from those pages as i had creating them.
>
> with kind regards,
> axel kohlmeyer.
>
>
> p.s.: if you want to bookmark or reference the tutorial
> please use the URL:
> http://www.theochem.ruhr-uni-bochum.de/go/cpmd-vmd.html
> as the underlying link may change in the future. thanks.
>
> --
> =======================================================================
> Axel Kohlmeyer e-mail: axel.kohlmeyer at theochem.ruhr-uni-bochum.de
> Lehrstuhl fuer Theoretische Chemie Phone: ++49 (0)234/32-26673
> Ruhr-Universitaet Bochum - NC 03/53 Fax: ++49 (0)234/32-14045
> D-44780 Bochum http://www.theochem.ruhr-uni-bochum.de/~axel.kohlmeyer/
> =======================================================================
> If you make something idiot-proof, the universe creates a better idiot.
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