[CPMD-list] Announce: CPMD VMD visualization tutorial

HW Sheng hwsheng at jhu.edu
Thu Dec 18 20:48:41 CET 2003


  Axel, 

  Many thanks for making the wonderful webpage available to us. 

  Howard
  ----- Original Message ----- 
  From: "Axel Kohlmeyer" <axel.kohlmeyer at theochem.ruhr-uni-bochum.de>
  To: <cpmd-list at cpmd.org>; <vmd-l at ks.uiuc.edu>
  Sent: Thursday, December 18, 2003 2:25 PM
  Subject: [CPMD-list] Announce: CPMD VMD visualization tutorial


  > 
  > dear readers of the CPMD and VMD mailing lists,
  > 
  > i am pleased to officially announce my tutorial webpages
  > for visualizing molecular simulation / electron structure
  > data using the VMD program (http://www.ks.uiuc.edu/Research/vmd/).
  > 
  > the tutorial is available at:
  > 
  > http://www.theochem.ruhr-uni-bochum.de/go/cpmd-vmd.html
  > 
  > although the main focus and the initial inspiration 
  > of these pages root in the need to visualize data 
  > from ab initio molecular dynamics simulations with
  > the CPMD program (http://www.cpmd.org/), many examples
  > and scripts should be easily transferable to other 
  > programs or at least be usable as template for your 
  > own scripts or visualization. Most of the examples and
  > many of the required inputs, scripts and data files
  > are available for download.
  > 
  > many of the examples shown in the tutorial have become possible 
  > because the recently released version 1.8.2 VMD incorporates 
  > largely improved support for xyz files with
  > velocities/gradients, xyz movies, native CPMD trajectory 
  > files, gaussian cube files and visualization of 
  > volumetric data. With these additions and the 
  > flexible scriptability, VMD has become a very powerful tool
  > for visualizing (ab initio) molecular dynamics and 
  > electron structure data.
  > 
  > many thanks to the VMD people for making 
  > such a nice visualization tool available.
  > 
  > a special thanks to john stone, holger langer, 
  > eduard schreiner, amalendu chandra, volker kleinschmidt,
  > and domink marx for providing inspiration, support, 
  > encouragement and data for the examples.
  > 
  > corrections, improvements, suggestions, praise, 
  > flames (if deserved), donations (in the form of
  > graphics hardware and/or computer resources)
  > are highly welcome. although the amount of time i 
  > can dedicate to this kind of work is rather limited,
  > i hope be able further improve and expand the tutorial
  > in the future.
  > 
  > i hope you will have as much fun looking at and 
  > learning from those pages as i had creating them.
  > 
  > with kind regards,
  >      axel kohlmeyer.
  > 
  > 
  > p.s.: if you want to bookmark or reference the tutorial
  > please use the URL:
  > http://www.theochem.ruhr-uni-bochum.de/go/cpmd-vmd.html
  > as the underlying link may change in the future. thanks.
  > 
  > --
  > =======================================================================
  > Axel Kohlmeyer       e-mail: axel.kohlmeyer at theochem.ruhr-uni-bochum.de
  > Lehrstuhl fuer Theoretische Chemie          Phone: ++49 (0)234/32-26673
  > Ruhr-Universitaet Bochum - NC 03/53         Fax:   ++49 (0)234/32-14045
  > D-44780 Bochum  http://www.theochem.ruhr-uni-bochum.de/~axel.kohlmeyer/
  > =======================================================================
  > If you make something idiot-proof, the universe creates a better idiot.
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  > CPMD-list at cpmd.org
  > http://www.cpmd.org/mailman/listinfo/cpmd-list
  > 





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