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Output File Reference

Incomplete list of the https used or created by CPMD:


File 		 Contents                     


RESTART Restart http
RESTART.x Old/New restart https
LATEST Info http on the last restart file

GEOMETRY Current ionic positions and velocities
GEOMETRY.xyz Current ionic positions and velocities in Å
GEOMETRY.scale Current unit cell vectors in Åand atomic units
and ionic positions in scaled coordinates
GSHELL $ \mathbf{G}^2$ (NOT normalized), G-shells $ \vert\mathbf{G}\vert$ in a.u.
and related shell index

TRAJECTORY All ionic positions and velocities along the trajectory
TRAJEC.xyz All ionic positions along the trajectory in xyz-format
TRAJEC.dcd All ionic positions along the trajectory in dcd-format
GEO_OPT.xyz All ionic positions along the geometry optimization
in xyz-format
ENERGIES All energies along the trajectory
MOVIE Atomic coordinates in Movie format

STRESS The ``trajectory'' of stress tensors
CELL The ``trajectory'' of the unit cell
CONSTRAINT The ``trajectory'' of constraint/restraint forces
METRIC The ``trajectory'' of collective variable metric (restraints only)
DIPOLE The ``trajectory'' of dipole moments

DENSITY.x Charge density in Fourier space
SPINDEN.x Spin density in Fourier space
ELF Electron localization function in Fourier space
LSD_ELF Spin polarized electron localization function
ELF_ALPHA Electron localization function of the alpha density
ELF_BETA Electron localization function of the beta density
WAVEFUNCTION Wavefunction instead of density is stored

HESSIAN Approximate Hessian used in geometry optimization
FINDIF Positions and gradients for finite
difference calculations
VIBEIGVEC Eigenvectors of Hessian
MOLVIB The matrix of second derivatives,
as used by the program MOLVIB
VIB1.log Contains the modes 4-3N in a style
similar to the gaussian output for
visualization with MOLDEN, MOLEKEL,...
VIB2.log Contains the modes 1-3N-3
ENERGYBANDS Eigenvalues for each k points
KPTS_GENERATION Output of k points generation
WANNIER_CENTER Centers of the Wannier functions
WC_SPREAD Spread of the Wannier functions
WC_QUAD Second moments of the Wannier functions as :
ISTEP QXX QXY QXZ QYY QYZ QZZ
IONS+CENTERS.xyz Trajectory of ionic positions and WFCs in Å
WANNIER_DOS Projection of the Wannier functions
onto the Kohn-Sham states
WANNIER_HAM KS Hamiltonian in the Wannier states representation
WANNIER_1.x Wannier orbitals or orbital densities
HARDNESS Orbital hardness matrix

RESTART.NMR Files needed to restart a NMR/EPR calculation
RESTART.EPR
RESTART.L_x
RESTART.L_y
RESTART.L_z
RESTART.p_x
RESTART.p_y
RESTART.p_z
j$ \alpha$ _B$ \beta$ .cube Files in .CUBE format that contain the
B$ \alpha$ _B$ \beta$ .cube induced current densities and magnetic fields
in an NMR calculation, respectively ( $ \alpha,\beta$ =x,y,z)

PSI_A.$ i$ .cube Files in .CUBE format that contain (spinpolarized)
PSI_B.$ i$ .cube orbitals and densities.
RHO_TOT.cube
RHO_SPIN.cube

QMMM_ORDER Relation between the various internal atom order lists in QM/MM runs.
QM_TEMP ``local'' temperatures of the QM/MM subsystems.
CRD_INI.grm Positions of all atoms of first step in Gromos format (QM/MM only).
CRD_FIN.grm Positions of all atoms of last step in Gromos format (QM/MM only).
MM_TOPOLOGY New Gromos format topology http (QM/MM only).
ESP Contains the ESP charges of the QM atoms (QM/MM only).
EL_ENERGY Contains the electrostatic interaction energy (QM/MM only).
MULTIPOLE Contains the dipole- and the quadrupole-moment of the quantum system.
MM_CELL_TRANS Contains the trajectory of the offset of the QM cell (QM/MM only).

In case of path integral runs every replica $ s=\{1, \dots , P\}$ gets its own RESTART_$ s$ , RESTART_$ s$ .x, DENSITY_$ s$ .x, ELF_$ s$ .x, and GEOMETRY_$ s$ http.

In contrast, in case of mean free energy path searches, each replica uses its own directory for nearly all https. Exception are the file LATEST and the geometry https named as for path integrals: GEOMETRY_$ s$ . The directories are built from the FILEPATH path (or else from the environment variable CPMD_FILEPATH) with the suffixes _$ s$ , $ s=\{1, \dots , P\}$ .


In general, existing https are overwritten!


Exceptions are ``trajectory'' type https (TRAJECTORY, ENERGIES, MOVIE, STRESS, ...), in them data are appended.


next up previous contents index
Next: F.A.Q. Up: Reference Manual Previous: Keywords in the Gromos   Contents   Index
Costas Bekas 2008-09-04